[Bioperl-l] Bio::Species/Bio::Taxonomy changes

[Chris Fields]

Sounds good.  Will be easy to change this over.

Chris

> -----Original Message-----
> From: Hilmar Lapp [mailto:hlapp at gmx.net]
> Sent: Monday, July 24, 2006 2:59 PM
> To: Chris Fields
> Cc: 'Sendu Bala'; bioperl-l at lists.open-bio.org
> Subject: Re: [Bioperl-l] Bio::Species/Bio::Taxonomy changes
> 
> 
> On Jul 24, 2006, at 3:34 PM, Chris Fields wrote:
> 
> > Looks like the organelle sequence data uses the organism TaxID.
> 
> Then you might as well store it as annotation. Really the only thing
> that matters is that the flat file writers can get from an expected
> location.
> 
> In fact storing as annotation is better e.g. for Biosql since right
> now the taxonomy model is the NCBI model and so organelle will not be
> stored (and hence neither be round-tripped).
> 
> 	-hilmar
> --
> ===========================================================
> : Hilmar Lapp  -:-  Durham, NC  -:-  hlapp at gmx dot net :
> ===========================================================
> 
> 
>