[Bioperl-l] Blast Output Parsing
    Prabu R 
    prabubio at gmail.com
       
    Thu Jul 20 12:01:35 EDT 2006
    
    
  
Dear All!
I am now trying to parse a Blast output using PERL.
I have to extract each alignment and have to parse the alignment. I mean, I
have to check whether a particular part of the given sequence got aligned
100%.
Anybody please tell me what module in PERL I have to use for getting this.
I've tried Bio::SearchIO.  But I didnt get any method to get the alignment.
Kindly help.
Thanks,
R. Prabu
    
    
More information about the Bioperl-l
mailing list