[Bioperl-l] [SO-devel] GFF3 Validator

[Suzanna Lewis]

That is nice. Thanks for the pointer.

-S

On Apr 9, 2006, at 1:37 PM, Lincoln Stein wrote:

> Hi All,
>
> I just wanted to draw your attention to a GFF3 validator put up by the  
> NIAID
> BRC program. It checks that the GFF3 file is well formed and that only  
> SO
> terms are used in the feature type column. It doesn't check that  
> parent/child
> relationships follow the spec, but it is a real good start.
>
> The documentation: http://iowg.brcdevel.org/gff3.html
> Standalone script: http://iowg.brcdevel.org/gff3validator/
> Web-based script:
> 	http://www.tigr.org/tigr-scripts/prok_manatee/brc-central/ 
> gff_validation.cgi
>
> Lincoln
>
> -- 
> Lincoln D. Stein
> Cold Spring Harbor Laboratory
> 1 Bungtown Road
> Cold Spring Harbor, NY 11724
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