[Bioperl-l] load sequence files into Mysql

Hilmar Lapp hlapp at gmx.net
Sun Dec 11 18:51:19 EST 2005


Have you tried the GenBank EST database flat files (in GenBank format)?

On Dec 11, 2005, at 12:47 PM, chen li wrote:

> Hi all,
>
> I already install Biosql on my computer and everything
> works fine. Now I want to download some mouse EST
> database files which can be read into mysql correctly
> without anymore modifications. Where can I download
> these files or other sequence files?  And I know it
> still has some problems to read the fasta files from
> NCBI(as Hilmar already points out). The link provided
> in the HOWTO is broken.
>
> Any suggestion will be appreciated and thanks in
> advance.
>
>
>
> Li
>
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-- 
-------------------------------------------------------------
Hilmar Lapp                            email: lapp at gnf.org
GNF, San Diego, Ca. 92121              phone: +1-858-812-1757
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