[Bioperl-l] loading data to biosql tables

Angshu Kar angshu96 at gmail.com
Wed Dec 7 21:12:36 EST 2005


Hi,

I've created 5 tables (taxon, taxon name, bioentry, biosequence,
biodatabase) in my postgresql database (linux box) using the biosql schema
ddl from
http://cvs.open-bio.org/cgi-bin/viewcvs/viewcvs.cgi/biosql-schema/sql/biosqldb-pg.sql?rev=1.29&cvsroot=biosql&content-type=text/vnd.viewcvs-markup
 .
Now I want to load the tables with arabidopsis data. Could you please let me
know where can I find such scripts for pgsql? And also I find at
http://bio.perl.org/Core/Latest/index.shtml that the DB module has not been
updated since 2001. Do I need to install that? Or are there some new
releases?

I'll be obliged if you can guide.

Thanks,
Angshu



More information about the Bioperl-l mailing list