[Bioperl-l] Extract field from Medline

Andrej Kastrin andrej.kastrin at siol.net
Wed Dec 7 07:40:05 EST 2005


Hello all,

big problem for me, small for you (while I'm noob in perl). I have a 
list of terms (i.e. genes, gene products) in row data format. Now I have 
to parse Medline (standard Medline format) and extract PMID, TI and AB 
(ID number, Title and Abstract) fields which involve any term in my term 
list. I already transform Medline "multiline" format to "single" line, 
so there is only one line per each field.

How to start? Thanks for any suggesstion.
Best, Andrej



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