[Bioperl-l] Re: Entrez gene parser code

Jason Stajich jason.stajich at duke.edu
Tue Apr 12 14:07:51 EDT 2005


Just beware that tools is grab-bag that people have a hard time 
negotiating already...

--
Jason Stajich
jason.stajich at duke.edu
http://www.duke.edu/~jes12/

On Apr 12, 2005, at 1:42 PM, Mingyi Liu wrote:

> Stefan Kirov wrote:
>
>> Thanks Mingyi,
>> This is very useful. I am not sure about the namespace. Maybe we 
>> should have a namespace for low-level parsers that do not create 
>> directly bioperl objects. What other people think of this?
>> Stefan
>>
> Yeah, Bio::ASN1 would be somewhat limited to just ASN.1 based files.  
> Maybe Bio::Tools::EntrezGene would be better since Bio::Tools seems to 
> be used to contain the parsers for some special formats.
>
> Mingyi
>
> _______________________________________________
> Bioperl-l mailing list
> Bioperl-l at portal.open-bio.org
> http://portal.open-bio.org/mailman/listinfo/bioperl-l
>



More information about the Bioperl-l mailing list