[Bioperl-l] Trouble install Bioperl-Ext-1.4 & dpAlign

Aaron J. Mackey amackey at pcbi.upenn.edu
Tue Jun 8 09:37:24 EDT 2004


Wow, for once this isn't an io_lib problem (I don't think), but an 
Ext/Align problem; Yee?

On Jun 8, 2004, at 9:07 AM, jany wrote:

> make[1]: Entering directory
> `/home/jiangnan/download/bioperl-ext/Bio/Ext/Align'
> PERL_DL_NONLAZY=1 /usr/bin/perl "-I../blib/lib"
> "-I../blib/arch" test.pl
> 1..2
> Not enough arguments for
> Bio::Ext::Align::Align_Protein_Sequences at
> /usr/lib/perl5/site_perl/5.8.0/Bio/Tools/dpAlign.pm
> line 300, near "'blosum62')"
> Not enough arguments for
> Bio::Ext::Align::Align_Protein_Sequences at
> /usr/lib/perl5/site_perl/5.8.0/Bio/Tools/dpAlign.pm
> line 355, near "'blosum62')"
> Compilation failed in require at test.pl line 11.
> BEGIN failed--compilation aborted at test.pl line 11.
> not ok 1
> make[1]: *** [test_dynamic] Error 255
> make[1]: Leaving directory
> `/home/jiangnan/download/bioperl-ext/Bio/Ext/Align'
> make: *** [test] Error 2
--
Aaron J. Mackey, Ph.D.
Dept. of Biology, Goddard 212
University of Pennsylvania       email:  amackey at pcbi.upenn.edu
415 S. University Avenue         office: 215-898-1205
Philadelphia, PA  19104-6017     fax:    215-746-6697



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