[Bioperl-l] How to handle multiple locations for SeqFeature

[Jason Stajich]

A Bio::Location::Split  SeqFeature locations are managed through the
->location method - simple, split, or fuzzy locations can be stored there.

start/end/strand are convience functions in the SeqFeature::Generic
implementation and it delegates to the location object as to what start
and end should be.

Brian covers this briefly in his new Feature-Annotation HOWTO
http://bioperl.org/HOWTOs/html/Feature-Annotation.html#location
although as he says, it probably needs its own HOWTO...

-jason

On Wed, 14 Jan 2004, mack wrote:

> Hi,
>
> I would like to know how a single Bio::SeqFeature::Generic handle
> multiple locations?
> Thanks in advance.
>
> Cheers,
> Mack
>
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--
Jason Stajich
Duke University
jason at cgt.mc.duke.edu