[Bioperl-l] parsing FASTA output

[Yin Yanbin]

Hello,

I wrote a script to parse several tFASTY search results. For some input files, it works well, but for others it crashed and gave out the following warnings:


-------------------- WARNING ---------------------
MSG: Unrecognized alignment line (3) ' statistics sampled from 60000 to 665286 sequences'
---------------------------------------------------
Modification of non-creatable array value attempted, subscript -3 at /usr/local/lib/perl5/site_perl/5.6.1/Bio/SearchIO/fasta.pm line 348, <GEN1> line 229825.


I updated my bioperl system, but it still compained.

Did anyone could help me with this? Thanks in advance!

Yanbin