[Bioperl-l] remote blast fix

Jason Stajich jason at cgt.duhs.duke.edu
Wed Sep 3 14:28:09 EDT 2003


I've committed the very simple fix.

If you don't want to/cannot deal with upgrading your Bioperl code locally
you can just add this to your scripts.

This module was written to be intentionally flexible so I encourage folks
who use it to read the code and to read more about how to use the CGI
script from the NCBI site.


use Bio::Tools::Run::RemoteBlast;
$Bio::Tools::Run::RemoteBlast::RIDLINE = 'RID\s+\=\s+(\S+)';

See: http://bugzilla.open-bio.org/show_bug.cgi?id=1500
for more info.

--
Jason Stajich
Duke University
jason at cgt.mc.duke.edu


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