[Bioperl-l] bioperl-1.2.2 - Release Candidiate 2

[Heikki Lehvaslaiho]

Confirmed and fixed.  Thanks, Rob!

I removed all lines using Root::Version. All t/Biograpics.t tests pass
now:

Bio/Graphics/Glyph/Factory.pm:56:use Bio::Root::Version;
Bio/Graphics/Glyph.pm:7:use Bio::Root::Version;
Bio/Graphics/Util.pm:11:use Bio::Root::Version;

	-Heikki

On Sun, 2003-07-06 at 22:15, Rob Edwards wrote:
> I get one error with this rc:
> 
> t/BioGraphics: GD or Text::Shellwords modules are not installed. This means that Bio::Graphics module is unusable. Skipping tests.
> both of these are installed, and the error message is wrong. In fact, the correct error is:
> Can't locate Bio/Root/Version.pm in @INC
> 
> The two files are Bio/Graphics/Glyph.pm and Bio/Graphics/Glyph/Factory.pm, both have use Bio::Root::Version that can be commented out to get t/BioGraphics to run without error.
> 
> All other tests and whatnot pass just fine using perl 5.8.0
> 
> Rob
> 
> 
> 
> 
> 
> 
> On Sun, Jul 06, 2003 at 11:14:58AM +0100, Heikki Lehvaslaiho wrote:
> > bioperl-1.2.2 - Release Candidiate 2 is now available at
> > 
> >   http://bioperl.org/DIST/bioperl-1.2.2rc2.tar.gz
> > 
> > (This time the URL is correct)
> > 
> > Most important changes from RC1 are:
> > 
> > * Bio::OntologyIO::dagflat fixes 
> > * fixes to GenBank entry web retrieval and parsing
> > * Bio::Graphics and GFF fixes from head are now in
> > 
> > The more detailed change log is in the root directory file 'Changes'.
> > 
> > Unless we hear back from you, this will be released as official 1.2.2 in
> > a few days time.
> > 
> > 	-Heikki
> > 
> > -- 
> > ______ _/      _/_____________________________________________________
> >       _/      _/                      http://www.ebi.ac.uk/mutations/
> >      _/  _/  _/  Heikki Lehvaslaiho    heikki_at_ebi ac uk
> >     _/_/_/_/_/  EMBL Outstation, European Bioinformatics Institute
> >    _/  _/  _/  Wellcome Trust Genome Campus, Hinxton
> >   _/  _/  _/  Cambs. CB10 1SD, United Kingdom
> >      _/      Phone: +44 (0)1223 494 644   FAX: +44 (0)1223 494 468
> > ___ _/_/_/_/_/________________________________________________________
> > 
> > _______________________________________________
> > Bioperl-l mailing list
> > Bioperl-l at portal.open-bio.org
> > http://portal.open-bio.org/mailman/listinfo/bioperl-l
-- 
______ _/      _/_____________________________________________________
      _/      _/                      http://www.ebi.ac.uk/mutations/
     _/  _/  _/  Heikki Lehvaslaiho    heikki_at_ebi ac uk
    _/_/_/_/_/  EMBL Outstation, European Bioinformatics Institute
   _/  _/  _/  Wellcome Trust Genome Campus, Hinxton
  _/  _/  _/  Cambs. CB10 1SD, United Kingdom
     _/      Phone: +44 (0)1223 494 644   FAX: +44 (0)1223 494 468
___ _/_/_/_/_/________________________________________________________