[Bioperl-l] Using IO::Filter::gzip with Bio::SeqIO
birney at ebi.ac.uk
Fri Feb 14 08:03:31 EST 2003
On Thu, 13 Feb 2003, Michael Muratet wrote:
> Has anyone tried/succeeded in using one of the IO filters with SeqIO to read
> sequences from gziped (like they come from Genbank) files?
open(F,"gunzip -c $filename |");
$seqin = Bio::SeqIO->new( -format => $format, -fh => \*F);
> Could I have an example? I can't get it to work.
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