[Bioperl-l] RemoteBlast other than NCBI.

Jason Stajich jason at cgt.mc.duke.edu
Thu Feb 13 13:40:25 EST 2003

You just change the BASE URL like this (with the caveat that it accepts
the same CGI parameters as the one at NCBI and operates in the same way):

use Bio::Tools::Run::RemoteBlast;
$Bio::Tools::Run::RemoteBlast::URLBASE = 'http://my/local/host';


On Thu, 13 Feb 2003, Prachi Shah wrote:

> Is there a way to use HTTP blast at some site other
> than NCBI? I need something exactly like RemoteBlast
> but which sends out requests to the server I specify.
> Actually, we have a (so called) local blast set up at
> a central server in the university and there is a HTTP
> access to it which is similar to the NCBI Blast. Could
> I send requests to that HTTP site instead of NCBI with
> something like RemoteBlast? If not, how difficult
> would it be to modify RemoteBlast for this?
> thanks,
> Prachi.
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Jason Stajich
Duke University
jason at cgt.mc.duke.edu

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