[Bioperl-l] t/SimpleAlign: not ok 18

[Allen Smith]

t/SimpleAlign.............1..53
ok 1
ok 2
ok 3
ok 4
ok 5
ok 6
ok 7
ok 8
ok 9
ok 10
ok 11
ok 12
ok 13
ok 14
ok 15
ok 16
ok 17
not ok 18
# Test 18 got: 'REELVYLAKLAEQAERYEEMVEFMKKVAESGASAEELSVEERNLLSVAYKNVIGARRASW' (t/SimpleAlign.t at line 53)
#    Expected: 'REDLVYLAKLAEQAERYEEMVEFMKKVAESGAPAEELSVEERNLLSVAYKNVIGARRASW'
ok 19
ok 20
ok 21
ok 22
ok 23
ok 24
ok 25
ok 26
ok 27
ok 28
ok 29
ok 30
ok 31
ok 32
ok 33
ok 34
ok 35
ok 36
ok 37
ok 38
ok 39
ok 40
ok 41
ok 42
ok 43
ok 44
ok 45
ok 46
ok 47
ok 48
ok 49
ok 50
ok 51
ok 52
ok 53
FAILED test 18
        Failed 1/53 tests, 98.11% okay

bioperl-1.0.2.

perl -V:

Summary of my perl5 (revision 5.0 version 8 subversion 0) configuration:
  Platform:
    osname=irix, osvers=6.5, archname=IP30-R12000-irix-thread-multi-64int-ld
    uname='irix64 cesario 6.5 04101931 ip30 '
    config_args='-DDEBUGGING -Dusemorebits -Dcc=cc -n32 -mips4 -r12000 -TARG:platform=ip30:processor=r12000 -Wl,-woff,84 -woff 1009,1110,1047'
    hint=recommended, useposix=true, d_sigaction=define
    usethreads=define use5005threads=undef useithreads=define usemultiplicity=define
    useperlio=define d_sfio=undef uselargefiles=define usesocks=undef
    use64bitint=define use64bitall=undef uselongdouble=define
    usemymalloc=n, bincompat5005=undef
  Compiler:
    cc='cc -n32 -mips4 -r12000 -TARG:platform=ip30:processor=r12000 -Wl,-woff,84 -woff 1009,1110,1047', ccflags ='-DDEBUGGING -D_SGI_SOURCE -D_SGI_REENTRANT_FUNCTIONS -D_SGIAPI -D_POSIX1C -I/server/people/staff/easmith/include -DPTHREAD_H_FIRST -D_BSD_TYPES -D_BSD_TIME -woff 1184,1552 -I/usr/local/include -DLANGUAGE_C -DHAS_LDBL_SPRINTF_BUG -DHAS_LDBL_SPRINTF_BUG_LESS1',
    optimize='-O3 -OPT:fast_exp=ON:Olimit=0 -TENV:X=1 -LNO:opt=1:ou_further=3:gather_scatter=2 -OPT:fold_unsafe_relops=OFF:div_split=OFF:IEEE_arithmetic=1:roundoff=0 -OPT:got_call_conversion=OFF:space=OFF',
    cppflags='-DDEBUGGING -D_SGI_SOURCE -D_SGI_REENTRANT_FUNCTIONS -D_SGIAPI -D_POSIX1C -I/server/people/staff/easmith/include -DPTHREAD_H_FIRST -D_BSD_TYPES -D_BSD_TIME -I/usr/local/include -DLANGUAGE_C -DHAS_LDBL_SPRINTF_BUG -DHAS_LDBL_SPRINTF_BUG_LESS1'
    ccversion='MIPSpro Compilers: Version 7.3.1.3m', gccversion='', gccosandvers=''
    intsize=4, longsize=4, ptrsize=4, doublesize=8, byteorder=87654321
    d_longlong=define, longlongsize=8, d_longdbl=define, longdblsize=16
    ivtype='long long', ivsize=8, nvtype='long double', nvsize=16, Off_t='off_t', lseeksize=8
    alignbytes=16, prototype=define
  Linker and Libraries:
    ld='ld -mips4 -n32 -woff 84', ldflags ='-L/server/people/staff/easmith/lib32 -L/usr/lib32/mips4 -L/usr/lib32 -L/lib32 -rpath /server/people/staff/easmith/lib32:/usr/lib32/mips4:/usr/lib32:/lib32 -Wl,-woff,84'
    libpth=/server/people/staff/easmith/lib32 /usr/lib32/mips4 /usr/lib32 /lib32
    libs=-lgdbm -ldb -lm -lpthread
    perllibs=-lm -lpthread
    libc=/usr/lib32/libc.so, so=so, useshrplib=false, libperl=libperl.a
    gnulibc_version=''
  Dynamic Linking:
    dlsrc=dl_dlopen.xs, dlext=so, d_dlsymun=undef, ccdlflags=' '
    cccdlflags=' ', lddlflags='-shared -check_registry /usr/lib32/so_locations -L/server/people/staff/easmith/lib32 -L/usr/lib32/mips4 -L/usr/lib32 -L/lib32'


Characteristics of this binary (from libperl): 
  Compile-time options: DEBUGGING MULTIPLICITY USE_ITHREADS USE_64_BIT_INT USE_LONG_DOUBLE USE_LARGE_FILES PERL_IMPLICIT_CONTEXT
  Locally applied patches:
        DEVEL17807
        DEVEL17848
        DEVEL17874
        DEVEL17875
        DEVEL17881
  Built under irix
  Compiled at Sep 10 2002 20:11:45
  @INC:
    /usr/share/lib/perl5/5.8.0/IP30-R12000-irix
    /usr/share/lib/perl5/5.8.0
    /usr/share/lib/perl5/site_perl/5.8.0/IP30-R12000-irix
    /usr/share/lib/perl5/site_perl/5.8.0
    /usr/share/lib/perl5/site_perl/5.6.0
    /usr/share/lib/perl5/site_perl/5.005
    /usr/share/lib/perl5/site_perl
    .


	-Allen

-- 
Allen Smith			http://cesario.rutgers.edu/easmith/
September 11, 2001		A Day That Shall Live In Infamy II
"They that can give up essential liberty to obtain a little temporary
safety deserve neither liberty nor safety." - Benjamin Franklin