[Bioperl-l] RootI again

[Chris Mungall]

Ah, OK - thanks.

On Wed, 1 May 2002, Lincoln Stein wrote:

> You should be inheriting from Bio::SeqFeatureI and Bio::Root.  The
> issue is that you are not bringing in Bio::Roo.
>
> Lincoln
>
> Chris Mungall writes:
>  > Yes, I know this was discussed last month...
>  >
>  > It seems it'll be a while before this is sorted out - but in the meantime
>  > can we get rid of the deprecation warnings in RootI?
>  >
>  > I've just changed one of our in house classes to inherit off of
>  > Bio::SeqFeatureI ( < RangeI < RootI), and suddenly my stderr goes crazy
>  >
>  > Can I fix and commit RootI so that it only carps, say, if
>  > $ENV{BIOPERL_DEVELOPER} is set?
>  >
>  > I have to say the intricacies of the RootI problem are beyond me, but this
>  > should be a harmless change.
>  >
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