[Bioperl-l] Portability

Jason Stajich jason@cgt.mc.duke.edu
Thu, 18 Jul 2002 16:07:05 -0400 (EDT)


There is no reason this shouldn't work, I regularly use the same bioperl
dist in path on OSF1, Solaris, and Linux boxes by having my PERL5LIB path
pointing to the same dir in my homedir.

However, you'll still need to install all the necessary support modules
GD, IO::String, LWP etc on the separate machines.  There isn't any
architecture specific code in the core modules but you would need to build
and install separately the bioperl-ext module if you are interested in
that specialized functionality.

-jason

 On Wed, 17 Jul 2002, Brzoska, Pius wrote:

> We have Linux, OSF, and Solaris servers. Could we install bioperl on a
> crossmounted netapp which then serves all operating systems  and set the
> environment variables for blast and such accordingly or are there other
> Operating specific issues .
> Thanks
>
>
> Pius Brzoska, Ph.D.
> Bioinformatics
> Applied Biosystems
> 850 Lincoln Centre Drive
> Foster City, CA 94404
> Office: 650-554-2162
> Fax: 650-638-6222
>
>
>
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>

-- 
Jason Stajich
Duke University
jason at cgt.mc.duke.edu