[Bioperl-l] Intron Exons

[Alam Intikhab]

Dear Ann

I have seend the online databases for Intron Exon Structure, these are not
complete not updated. I know there are more then 200 memebers of protein
family I am looking for and in those databases I found not more then 10
members. Thats why I want to do it my self. From Swiss prot cross
references I can reach particular entery but but can not access intron
exon information directly, that's why I was asking that Is there not any
way to reach genomic information directly from swiss prot cross
references??


 On Sat, 26 Jan 2002, Ann Loraine wrote:

> Dear Alam,
> 
> Do you have access to the journals Bioinformatics or Nucleic Acids
> Research?
> 
> If yes, you might find what you need (or at least a start) in the January
> Nucleic Acids Research issues.  Every year in January NAR publishes papers
> describing numerous biological databases different groups have built.
> 
> Some of these include intron/exon structure databases -- so these might
> give you an idea of how to get started on your project.
> 
> Also, the journal Bioinformatics may have published some articles that
> could also help you.  So you might want to look there, as well.
> 
> Good luck!
> 
> Ann
> 
> ---
> 
> Ann E. Loraine
> http://www.loraine.net
> 
> On Sat, 26 Jan 2002, Alam Intikhab wrote:
> 
> > 
> > Hi everybody,
> > 
> > I am still wondering how I may get intron exon information from
> > genbank, directly. I have curated a list of cross references from
> > Swissprot for certain protein family but I can't get Genomic structure
> > directly from the genbank.
> > if anyone have an idea, please pass it on.
> > 
> > Intikhab
> > 
> > 
> > 
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>