[Bioperl-l] capturing AlignIO output

James Wasmuth james.wasmuth@ed.ac.uk
Mon, 02 Dec 2002 17:28:12 +0000


Hi all,

not sure this is specifically a bioperl question or more general Perl. 
 Anyway, I am trying to capture the text output from
$stream->write_aln($alignment) into a string, so that I can pattern 
search it

I've tried all sorts of avenues, but not the correct one.

Any ideas?
Many Thanks

James