[Bioperl-l] module proposal Bio::DB::PDB

[Jaime.Prilusky@weizmann.ac.il]

According to Ewan Birney:
> I would suggest setting up an abstract interface with methods like:
>    $db->get_Structure_by_id();
>    $query = $db->get_Structure_by_query($string);
>    where $query has methods ->next_structure, like StructureIO

Thank you for the feedback and valuable suggestions to our proposal
for a module to allow access (search, retrieval, analysis) to OCA and 
PDB databases.

We will start with Bio::DB::StructureI, an abstract interface to structure
databases, returning Bio::Structure objects and supporting related data.

Jaim

-- 
 Dr Jaime Prilusky                | Jaime.Prilusky@weizmann.ac.il
 Weizmann Institute of Science    | fax: 972-8-9344113
 76100 Rehovot - Israel           | tel: 972-8-9344959

 info URL http://bioinformatics.weizmann.ac.il/jaime_prilusky.html
 OCA is at http://bioinformatics.weizmann.ac.il:8500