[Bioperl-l] Megablast

[Jason Stajich]

Vidhya - 
We'd need to see some more details to know what is going on: 

* example output that didn't work
* which perl module you were using for blast parsing
* example code and exactly what wasn't working for you.

It may make more sense, so we can track this, if you want to enter this as
a bug with all the information I outlined above at the bugtracking page -
http://bio.perl.org/Bugs/

Hope we can help, I suspect megablast output was not factored into the
parser when it was written.

-Jason

On Mon, 23 Jul 2001, Vidhya Jagannathan wrote:

>  Hi there !
> 
>  I am newbie to Bioperl, And I have been quiet successful in using many
>  of your modules. But right now I am facing a Problem in Parsing the Normal
>  blastN ouput of Megablast results  Can any one help me out with that ???
> 
> 
>  Thanks in Advance 
> 
> 
>  Vidhya 
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Jason Stajich
jason@chg.mc.duke.edu
Center for Human Genetics
Duke University Medical Center 
http://www.chg.duke.edu/