Bioperl: Feature mapping.. clone to contig and vice versa

[Jason Stajich]

I would be interested in this Doug and would be willing to lend some help.  
I know this something my researchers need to be able to do better.

Jason
On Fri, 24 Mar 2000, Doug Hyatt wrote:

> 
> Hello,
> 
> I am looking for a script or routine that maps
> feature coordinates (i.e. of genes, exons, repeats, etc.)
> from their positions in a clone to the corresponding
> positions in the contig and vice versa (from contig to
> clone).   
> 
> Has such a routine been written for BioPerl?  If 
> not, I will be writing one... is there interest in
> this?
> 
> regards,
> Doug Hyatt
> Computational Biosciences
> Oak Ridge National Laboratory
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Jason Stajich
Center for Human Genetics
Duke University Medical Center
jason@chg.mc.duke.edu
(919)684-1806
http://www.duke.edu/~jes12/


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