[Biojava-l] DNATools lower case?

[George Waldon]

Hello Shirley,

I think you need to use AlternateTokenisation at some point; check  
BJ1.8.1 Cookbook at  
http://www.biojava.org/wiki/BioJava:Cookbook:Sequence

regards,

George

Quoting Shirley Hui <shirleyh at gmail.com>:

> Hi,
> I am using DNATools to generate dna Sequences.
> I noticed that the static methods in DNATools a(),c(),t(),g() map to lower
> case characters.
> I am using using DistributionLogo class to draw sequences logos for a set of
> dna Sequences.
> I think DistributionLogo is calling the static methods to map the
> nucleotides which is lower case.
> But I want the logo output the nucleotides in uppercase.  How can I do this?
> Thanks for your help
> shirley
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