[Biojava-l] equality of proteins based on their aminoacid sequence signature
Andy Yates
ayates at ebi.ac.uk
Wed Mar 9 20:27:39 UTC 2011
Hi Francois,
Neither Compounds nor Sequences have an over-ridden equals() & hashcode() method which is why you're seeing the current behaviour.
Andy
On 9 Mar 2011, at 20:12, François Le Fevre wrote:
> Dear all,
>
> I would like to know if 2 proteins that have the same sequence of aminoacid should be equals?
> I was wandering that 2 Sequence<AminoAcidCompound> that have exactly the same string signature should be the same.
> But it seems to be not the case.
> Is it normal?
>
> Thank for your help.
>
>
> Sequence<AminoAcidCompound> protein1 = MKRISTTITTTITITTGNGAG hash=801818331
> Sequence<AminoAcidCompound> protein2 = MKRISTTITTTITITTGNGAG hash=700804192
>
> protein1.equals(protein2) return false.
>
> Francois
>
> --
> ----------------------
> Francois LE FEVRE
>
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--
Andrew Yates Ensembl Genomes Engineer
EMBL-EBI Tel: +44-(0)1223-492538
Wellcome Trust Genome Campus Fax: +44-(0)1223-494468
Cambridge CB10 1SD, UK http://www.ensemblgenomes.org/
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