[Biojava-l] maven question

Andreas Prlic andreas at sdsc.edu
Thu Jul 21 17:55:45 UTC 2011


Hi Daniel,

you correctly specify where to get the .jars from, but you also need
to specify which of the modules you want to depend on. e.g.:

	<dependency>
			<groupId>org.biojava</groupId>
			<artifactId>biojava3-core</artifactId>
			<version>3.0.1</version>
			<type>jar</type>
			<scope>compile</scope>
		</dependency>

Andreas



On Thu, Jul 21, 2011 at 10:47 AM, Daniel Quest <daniel.quest at gmail.com> wrote:
> Hey all,
>
> not sure what the maven dependancy should be to get biojava to work in a
> maven project.
>
> I tried:
>
>  <dependencies>
>        <dependency>
>            <groupId>org.biojava</groupId>
>            <artifactId>biojava</artifactId>
>        <version>3.0.1</version>
>        </dependency>
>  </dependencies>
>
> But that does not appear to be working in intellij
>
> I did do:
>  <repositories>
>    <repository>
> <id>biojava-maven-repo</id>
> <name>BioJava repository</name>
> <url>http://www.biojava.org/download/maven/</url>
>  </repository>
> </repositories>
>
> does someone have an example pom.xml file for projects that use BioJava?
> Thanks
> -Daniel
> _______________________________________________
> Biojava-l mailing list  -  Biojava-l at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/biojava-l
>



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Dr. Andreas Prlic
Senior Scientist, RCSB PDB Protein Data Bank
University of California, San Diego
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