[Biojava-l] Bio Java API - Amino Acids Data

[Andy Yates]

Hi Omer,

If you are using BioJava3 then weight is available from the AminoAcidCompound object when taken from an AminoAcidCompoundSet. The other data points are not available from within BioJava. I know Andreas mentioned ages ago linking into one of the compound databases e.g. ChEBI but I don't think that's been done.

Regards,

Andy

On 21 Apr 2011, at 07:44, omer f wrote:

> Hi All,
> 
> I Applied to the "Amino Acid" Project,
> I found in the Bio Java API there is Amino Acids Objects,
> But what i couldn't find - where there is Data (weight,Charge...) about each
> Amino Acid,
> My question, is there basic Data base for Amino Acids or we should get it
> from user input,
> 
> Thank you,
> Omer.
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-- 
Andrew Yates                   Ensembl Genomes Engineer
EMBL-EBI                       Tel: +44-(0)1223-492538
Wellcome Trust Genome Campus   Fax: +44-(0)1223-494468
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