[Biojava-l] SITE records in PDBFileReader

Steve Darnell darnells at dnastar.com
Mon Aug 16 22:26:13 UTC 2010


I'm sorry for reposting this message.  I accidentally sent the previous one as HTML.

________________________________________
From: Steve Darnell 
Sent: Monday, August 16, 2010 5:19 PM
To: 'biojava-l at lists.open-bio.org'
Subject: SITE records in PDBFileReader

Greetings,

I am interested in parsing SITE records from a PDB file.  I looked over the org.biojava.bio.structure API, but I was unable to find reference to this functionality.  Does the PDBFileReader in BioJava extract SITE record information?  If not, would it be possible to add this capability to PDBFileReader and the Structure class?

SITE record format at wwPDB: http://www.wwpdb.org/documentation/format32/sect7.html 

Regards,
Steve Darnell




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