[Biojava-l] Depreciated methods

[Richard Holland]

> I am new to BioJava and I have been trying some of its examples. I came
> across some of the depreciated methods and I am not sure if they will be
> removed entirely any time soon? 

Deprecated = may be removed without notice in any future release. I
couldn't say for any individual method, but in general it's a bad idea
to use anything that is marked deprecated when writing new code.

> I also found some of the examples
> problematic and didn't run properly even though I am following the
> instructions stated in the comment section.

Could you specify exactly which examples didn't work, and the exact
problems you had with them?

thanks,
Richard

> Please let me know if you have answers for my questions.
> Best wishes,
> Ahmed
> 

-- 
Richard Holland, BSc MBCS
Finance Director, Eagle Genomics Ltd
M: +44 7500 438846 | E: holland at eaglegenomics.com
http://www.eaglegenomics.com/