[Biojava-l] A question about NexusFile and NewickTreeString

Tiago Antão tiagoantao at gmail.com
Tue Dec 15 11:43:54 UTC 2009


2009/12/15 Richard Holland <holland at eaglegenomics.com>:
> Hi there.
>
> I believe the code used to be able to parse this kind of tree, but TIago recently rewrote it so I'm no longer certain.
>
> Tiago - your new code doesn't seem to be coping with the insertion of a newline at random points in the Tree string. I think you might need to modify your tokenize() method to handle this better? Could you also add a unit test using this particular tree.


Yep, will take care of this over the weekend. Maybe before, but no promises.



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