[Biojava-l] How to get full query description from blast result

David Toomey dtoomey at rcsi.ie
Wed Oct 29 10:45:45 UTC 2008


Hi

I am parsing blast results and I need to get the complete query description line but I can only work out how to get the first part of the line. So for example in the blast result query

Query= sp|Q8I5D2|ABRA_PLAF7 101 kDa malaria antigen OS=Plasmodium
falciparum (isolate 3D7) GN=ABRA

I need to get all of the description above but I can only seem to retrieve the first part 'sp|Q8I5D2|ABRA_PLAF7' which I get from the queryId property of the annotation

Can anyone point me in the right direction for retrieving the complete query description?

Thanks

Dave





More information about the Biojava-l mailing list