[Biojava-l] Disulfide information in PDB files

Richard Holland holland at ebi.ac.uk
Wed Nov 14 03:55:24 EST 2007


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Currently this is not parsed - the parser does not read all the tags in
the most recent PDB specification.

Could you open a bug request at http://bugzilla.open-bio.org/ to
formally add this to our to-do list? Thanks!

cheers,
Richard

Brendan Duggan wrote:
> Greetings
> 
> I'm trying to mine some information on disulfides in
> the PDB and was hoping there might be a way of
> obtaining this information with the BioJava PDB
> parser.  However, I haven't been able to see anything
> like this mentioned in the API docs.  If it is
> currently not possible to extract disulfide
> information from PDB files are there any plans to
> implement this?
> 
> Thanks!
> 
> Brendan
> 
> 
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> 
> 
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