[Biojava-l] cvs downlod install

[Richard HOLLAND]

Your problem lies here:

> when i use in the folder C:\biojava\biojava-live\:
> (windows)
>   cd demos
>   javac seq\TestEmbl.java
> i obtain
> $ javac seq\TestEmbl.java
> error: cannot read: seqTestEmbl.java
> 1 error

Note that the java file has not been compiled. Hence when you later try
to run the compiled class, it's not there, so you get a NoClassDefFound
exception.

I suspect that either you accidentally left out the backslash (\)
between "seq" and "TestEmbl.java" when you typed the javac command, or
that Windows is misinterpreting the backslash. Try replacing it with a
double backslash (\\) or a forward slash (/).

cheers,
Richard

Richard Holland
Bioinformatics Specialist
GIS extension 8199
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> -----Original Message-----
> From: biojava-l-bounces at portal.open-bio.org 
> [mailto:biojava-l-bounces at portal.open-bio.org] On Behalf Of 
> D.Enrique ESCOBAR ESPINOZA
> Sent: Friday, December 02, 2005 1:54 PM
> To: biojava-l at biojava.org
> Subject: [Biojava-l] cvs downlod install
> 
> 
> i put the files:
>     *  bytecode-0.92.jar
>     * commons-cli.jar
>     * commons-collections-2.1.jar
>     * commons-dbcp-1.1.jar
>     * commons-pool-1.1.jar
> in my biojava directory: C:\biojava
> is set my classpath
> set CLASSPATH C:\biojava\biojava.jar;
> C:\biojava\bytecode-0.92.jar;
> C:\biojava\commons-cli.jar;
> C:\biojava\commons-collections-2.1.jar;
> C:\biojava\commons-dbcp-1.1.jar;
> C:\biojava\commons-pool-1.1.jar;.
> with cvs download:
> all biojava-live files where put into
> C:\biojava\biojava-live\
> so i m supposed to move these files up to
> C:\biojava\
> directory?
> **
> when i use in the folder C:\biojava\biojava-live\:
> (windows)
>   cd demos
>   javac seq\TestEmbl.java
> i obtain
> $ javac seq\TestEmbl.java
> error: cannot read: seqTestEmbl.java
> 1 error
> i obtain
>   java seq.TestEmbl seq\AL121903.embl
> i have:
> $ java seq.TestEmbl seq\AL121903.embl
> Exception in thread "main" java.lang.NoClassDefFoundError:
> seq/TestEmbl
> 
> --------------------------------------------------
> D.Enrique ESCOBAR ESPINOZA (B.Sc.) 
> http://adn.bioinfo.uqam.ca/~escd07097301/
> http://spaces.msn.com/members/escobarebio/
> ICQ#: 201778618
> -------------------------------------------------
> Tel:  (514) 523-8398
> Montreal QC Canada
> 
> 
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