[Biojava-l] Re: (no subject)

[Christian Storm]

Hi Christoph,

before you put in a lot of work, you might want to check the licenses. I
think STRAP comes under GPL, and Biojava comes under lGPL. This might cause
some problems, depending on what you plan to do.

Christian



> Message: 2
> Date: Fri, 8 Apr 2005 16:37:51 +0200 (CEST)
> From: "Dr. Christoph Gille" <christoph.gille at charite.de>
> Subject: [Biojava-l] (no subject)
> To: biojava-l at biojava.org
> Message-ID:
> 	<50314.192.168.220.204.1112971071.squirrel at webmail.charite.de>
> Content-Type: text/plain;charset=iso-8859-1
> 
> Hi,
> 
> I am currently working  on an interface biojava <==> STRAP
> (http://www.charite.de/bioinf/strap/,
> http://www.charite.de/bioinf/strap/doc/index.pdf).
> 
> First I create a GappedSequence object from a StrapProtein object.
> I include all STRAP anntotations and STRAP features.
> The features are subsets of the sequences with annotations like
> notes, URLs, TeXshade commands, Pymol commands, Rasmol commands.
> 
> Second I create a converter the other way round.
> It makes a StrapProtein from a biojava Sequence with all its annotations
> and features.
> 
> Does anybody has ideas, what tool could
> cooperate with STRAP using this interface ?
> 
> The STRAP plugin technology alows even larger JAVA
> programs to be plugged in, simply by copying the
> jar-library into a special directory.
> Currently a few groups are creating plugins for STRAP.
> I hope that people will benefit from the biojava interface.
> 
> Christoph