[Biojava-l] Circular Location
Schreiber, Mark
mark.schreiber at agresearch.co.nz
Tue Jan 28 11:48:48 EST 2003
Hi -
I have committed a fix to CVS for this, please feel free to test it. The
circular stuff is, logically speaking, really weird with many odd
concepts so the more testing the better.
- Mark
> -----Original Message-----
> From: Yasumasa Shigemoto [mailto:yshigemo at genes.nig.ac.jp]
> Sent: Friday, 24 January 2003 6:13 p.m.
> To: biojava-l at biojava.org
> Subject: [Biojava-l] Circular Location
>
>
> Hi
>
> I use the CircularLocation and LocationTools as follows,
> but it seems to return the wrong response.
>
> import org.biojava.bio.symbol.*;
>
> public class CircularTest {
> public static void main(String[] args) {
> try {
> Location[] locs = new Location[10];
> locs[0] =
> LocationTools.makeCircularLocation(18,24,20);
> locs[1] =
> LocationTools.makeCircularLocation(18,24,20);
> locs[2] =
> LocationTools.makeCircularLocation(2,8,20);
> locs[3] =
> LocationTools.makeCircularLocation(4,10,20);
> locs[4] =
> LocationTools.makeCircularLocation(18,23,20);
>
> System.out.println(LocationTools.areEqual(locs[0], locs[1]));
>
> System.out.println(LocationTools.contains(locs[0], locs[1]));
>
> System.out.println(LocationTools.overlaps(locs[0], locs[2]));
>
> System.out.println(LocationTools.overlaps(locs[2], locs[3]));
>
> System.out.println(LocationTools.overlaps(locs[0], locs[4]));
> } catch (Exception ex) {
> ex.printStackTrace();
> }
> }
> }
>
> > java CircularTest
> true
> true
> false
> true
> false
>
> I think the whole of result is 'true'.
>
> Environment
> biojava-1.3pre1.jar, j2sdk1.4.0
>
> Any help would be most appreciated.
>
> Yasumasa Shigemoto
>
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> http://biojava.org/mailman/listinfo/biojava-l
>
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