[Biojava-l] web service problems

Matthew Pocock matthew_pocock@yahoo.co.uk
Tue, 21 Jan 2003 13:27:48 +0000


Hi,

I'm having some problems with biojava in a web service I wrote. I'm 
using biojava.jar and bj-ensembl.jar along with my own jsp and servlets. 
It used to work (before xmas), but now I get an exception: 
"NoSuchFieldError: naturalOrder". This is a field in Location (in 
biojava.jar), and the calling code is EnsemblTranscript (in 
bj-ensembl.jar). I can build both jars from scratch using ant, so javac 
thinks the field exists. I can javap the Location interface (using the 
biojava.jar in the deployed .war) and naturalOrder appears, so it realy 
should be available.

I've tried deploying in tomcat (v 4.0.6 & 4.1.18, LE and full versions) 
and in JBoss (v3). They all give the same exception. Has anybody seen 
symptoms like this before?

Thanks,

Matthew

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