[Biojava-l] How to mask a part of SymbolList?

[Adriano Holanda]

How can I mask part of a sequence using the structure?

while (stream.hasNext()) {
   Sequence seq = getSomeSequence();
   System.out.println(seq.getName()); 
	   
   for (int pos = startMask; pos <= endMask; ++pos) {
	Symbol sym = seq.symbolAt(pos); 
	// I WANT TO CHANGE THE SYMBOL sym TO X
   }
} //end

Thanks in advance;

Adriano.


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