[Biojava-l] problem in format.writesequence for EmblLikeFormat

Matthew Pocock matthew_pocock@yahoo.co.uk
Wed, 17 Jul 2002 18:44:55 +0100


You're a star Keith. This is one of our few recurrent classes of bug. Do 
we have regression tests for this (in embl, genbank and fasta) yet?

Matthew

Keith James wrote:
>>>>>>" " == saerts  <saerts@mailserv.esat.kuleuven.ac.be> writes:
>>>>>
> 
>      > Hello, There appears to be a problem when writing a sequence to
>      > file in EMBL format, but only if it contains a multiple of 60
>      > nucleotides (there are 60 nt's on each line) -> the last line
>      > of nucleotides is not written and the nucleotide-count of the
>      > last line is incorrect.
> 
>      > Example code and example sequence files below. The line from
>      > 1141 to 1200 disappears.
> 
> Hi,
> 
> This is now fixed on the CVS head and also on the 1.2 branch.
> 
> Keith
>