[Biojava-l] exception with no stacktrace
Guoneng Zhong
Guoneng.Zhong@med.nyu.edu
Thu, 28 Feb 2002 16:31:03 -0500
Hi,
I tried the following lines and got the following exception. Problem is
that I don't know what the problem is. What line and what the
underlying cause. There is no stacktrace beyond my own...
Thanks ahead for all the help!
G
AlignmentFormat format = new MSFAlignmentFormat();
Alignment alignment = format.read(new BufferedReader(new
FileReader(file)));
List labels = alignment.getLabels();
System.out.println("Retrieved "+labels.size()+" labels");
for(int i=0;i<labels.size();i++){
SymbolList list = (SymbolList)labels.get(i);
System.out.println(list.seqString());
}
MSFFormatReader null
Exception in thread "main" java.lang.NullPointerException
at test.TestClustalW.readFile(TestClustalW.java:27)
at test.TestClustalW.main(TestClustalW.java:20)