[Biojava-l] parse protein sequences in GenBank format

[richard cai]

Hello,

I am trying to parse a flat file of refseq protein
sequences in what looks like GenBank format.  However,
although the program, using SeqIOTools.readGenbank()
and seq=seqs.nextSequence(), works fine with DNA
sequences in GenBank format, it fails to extract the
protein sequences.  Does this method of using
readGenbank() only deal with DNA sequences?

Thanks.

Rich

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