[Biojava-l] BLAST Parser Tutorial

[Simon Brocklehurst]

Ramkumar N wrote:

> I apologize for the newbie question upfront.
>
> I tried the tutorial on Blast Parsing found on the web site, using the code
> found in the demos/eventbasedhandling/TutorialEx1.java directory and get the
> following error:
>
>         >javac TutorialEx1.java
>         TutorialEx1.java:72: cannot resolve symbol
>         symbol  : class TutorialEx1Handler
>         location: class eventbasedparsing.TutorialEx1
>                     (ContentHandler) new TutorialEx1Handler(oDatabaseIdList);
>                                          ^
>         1 error
>
> I have tried other demos e.g. seq/TestEmbl and it works fine. I also have
> xerces.jar and bytecode.jar in my CLASSPATH.

Hi,

I think you're compiling from the wrong directory.  Go up one directory, and do:

javac eventbasedparsing/TutorialEx1.java

Let me know if it works!

Simon
--
Simon M. Brocklehurst, Ph.D.
Head of Bioinformatics & Advanced IS
Cambridge Antibody Technology
The Science Park, Melbourn, Cambridgeshire, UK
http://www.CambridgeAntibody.com/
mailto:simon.brocklehurst@CambridgeAntibody.com