[Biojava-l] More ABI information

[Schreiber, Mark]

One way to screen for mutations would be to use phred or similar to process
the ABI files and use the new Phred classes to do the calculations.

MArk


Mark Schreiber
Bioinformatics
AgResearch Invermay
PO Box 50034
Mosgiel
New Zealand

PH: +64 3 489 9175

 

> -----Original Message-----
> From: David Huen [mailto:smh1008@cus.cam.ac.uk]
> Sent: Thursday, June 28, 2001 4:38 AM
> To: tim.dilks
> Cc: biojava-l@biojava.org
> Subject: Re: [Biojava-l] More ABI information
> 
> 
> On Wed, 27 Jun 2001, tim.dilks wrote:
> 
> > Hi
> > 
> > The source code for an ABI file parser is now freely available at:
> > http://people.ne.mediaone.net/dhk42/jabiview.html
> > 
> > I'll email the author to see if we wants the contribute the 
> code to Biojava.
> > 
> Thanks for all your help.  I was considering writing a little 
> tool that
> would let me view multiple aligned electropherograms to look for
> mutations.  I've just spent 2 days on that &*^£$% EditView 
> tool and if I
> didn't laugh, I'd cry.
> 
> Regards,
> David Huen
> 
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