[Biojava-l] The org.biojava.bio.program.* hierarchy

[Keith James]

>>>>> "Thomas" == Thomas Down <td2@sanger.ac.uk> writes:

    Thomas> On Tue, Jun 19, 2001 at 01:49:34PM +0100, Keith James
    Thomas> wrote:
    >>  Related to this, I'm working on Blast/Fasta SAX2 -> Biojava
    >> objects (org.biojava.bio.search.* objects so far, rather than
    >> org.biojava.bio.seq.homol) and was puzzling over where this
    >> should go. Any preferences?

    Thomas> Cool.  That would be a good thing to get in before the 1.2
    Thomas> freeze.  Do you have any idea of timescale, yet?

I'm not sure how long as I've got very little experience of writing
SAX ContentHandlers. I'll aim for getting it in before the freeze.

I was perusing the StAX API to see whether it might help me. I'm only
going to want a small subset of the data defined by the BlastLike DTD,
but then others could add plugins for their area of interest, if
needed.

-- 

-= Keith James - kdj@sanger.ac.uk - http://www.sanger.ac.uk/Users/kdj =-
The Sanger Centre, Wellcome Trust Genome Campus, Hinxton, Cambs CB10 1SA