[Biojava-l] GenBank Parser Error
Simon Foote
foote@nrcbsa.bio.nrc.ca
Mon, 12 Feb 2001 11:21:43 -0500
Hi,
I have stumbled across an error with the GenBank parser. If the
location string for a gene is similar to the following:
gene order(AF084223.1:1..265,1..245)
It will give a bad locator error. (Test with Genbank Accession AF084223)
I know the version being in the parantheses is causing the problem, but
haven't figured out an easy way to correct this yet.
Anyone have a quick fix for this.
Cheers,
Simon
--
Bioinformatics Specialist
Institute for Biological Sciences
National Research Council of Canada
[T] 613-991-4342 [F] 613-952-9092