[Biojava-dev] Question about toPDB method.

[M Venkataraman]

Hi:
I am new to bio-java. I need to load a PDB file make some modifications and then write it out. 

As a first step, I am trying to load a PDBfile using PDBReader and write it back out. 

I have the following code.

PDBFileReader reader = new PDBFileReader();
Structure struc = reader.getStructure(pdbFile.pdb);
System.out.println(struc.toPDB());

I see that the output file is different from the input file. Do I need to do something different for conserving the other contents of the PDB file?

Thanks

Maha