[Biojava-dev] helping biojava

[Tony Power]

Hi Andreas,

Thank you for your reply.
In the page you suggested I can find the following items:

- Genbank parser
- Balibase
- UniProt (XML/txt)

Do you believe any of these are worthy of a masters project? I am asking
this because I don't know what is involved.
I guess a parser should be a "simple" job (1-2 weeks)? I need something
that a student would be working during 3-6 months.
The work should result in a small conference publication/poster.

Something that could be done would be an app that needs one of those
modules, so the student would need to develop the module and the app.
Which of those 3 itens (if any, or others), in your point of view, would be
the most interesting for a masters project? If so, where can I find
information about the problem?

Thank you for your time,



On Thu, Nov 29, 2012 at 10:17 PM, Andreas Prlic <andreas at sdsc.edu> wrote:

> Hi Tony,
>
> A good start might be to write new parsers or work on converting an
> algorithm to Java....
>
> some of our feature requests are documented here:
>
> http://biojava.org/wiki/BioJava3_Feature_Requests
>
> hope that helps,
>
> Andreas
>
>
>
> On Thu, Nov 29, 2012 at 4:23 AM, Tony Power <power3d at gmail.com> wrote:
>
>> Hi all,
>> I have a student that is looking for ideas for her masters final work.
>> Is there any biojava need that would be an interesting subject to work on
>> for arround 3 or 4 months?
>> If so, please, let me know so I can propose it to the student. It might
>> not
>> accept it, but it's worth to try.
>> Cheers,
>> Tony
>> _______________________________________________
>> biojava-dev mailing list
>> biojava-dev at lists.open-bio.org
>> http://lists.open-bio.org/mailman/listinfo/biojava-dev
>>
>
>
>
>