[Biojava-dev] translateN patch for RNAToAminoAcidTranslator

Brad Chapman chapmanb at 50mail.com
Thu Mar 10 08:37:04 EST 2011


Hey all;
I was playing a bit with the TranscriptionEngine and the
translateNCodons option was not working due to some null pointer
exceptions trying to look up codons from non-existent "X" amino
acids. 

Bugzilla seems unhappy right now; I get a big ol' 'Sorry, entering bugs 
into the product BioJava has been disabled.' when trying to create a
new bug, so the patch is here:

https://gist.github.com/864088

This complements my earlier patch for a small issue in
getRNASequence:

http://bugzilla.open-bio.org/show_bug.cgi?id=3180

Thanks all -- Biojava 3 is great stuff,
Brad


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