[Biojava-dev] BioJava FastaReader to read lower-case fasta sequences

[Chuan Hock Koh]

Hi all,

I realized that BioJava FastaReader would discriminate between upper and
lower cases and throws CompoundNotFound error when the input file contains
protein sequences in lower case.

I am wondering if it is possible to have a boolean to indicate whether case
should be ignore in the Constructor.

Thanks,
Chuan Hock Koh

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