[Biojava-dev] biojava SVN

[Andy Yates]

As far as I remember you 'can' have one setup manually. I think I offered one hand-developed from one of my projects. Infact FYI:

http://code.google.com/p/dbcon/source/browse/#svn/trunk/maven-repo

It just requires the correct structure in place & it works. I went for it being hosted in SVN because there's a HTTP interface to it offered by Google. The EBI Maven repo is just a public HTTP directory. It's been some years since I did a deployment there but it's not hard to do & we should be able to do it locally & sync it to SVN 

Andy

On 30 Apr 2010, at 16:50, Richard Holland wrote:

> Could a small MVN repo be set up at OBF?
> 
> On 30 Apr 2010, at 16:48, Andy Yates wrote:
> 
>> Does anyone know how hard it would be to get these into the public maven repository? The EBI repo is all well & good but updating it relies on BioJava always having a committer at the EBI. Now I know that is a very likely statement but is it something we can rely on?
>> 
>> Andy
>> 
>> On 30 Apr 2010, at 16:44, Andreas Prlic wrote:
>> 
>>> Hi,
>>> 
>>> The BioJava SVN has not been fully compiling ever since the Hackathon. I
>>> guess things were quite in flux the last months and it is now time to make
>>> sure SVN fully compiles again.  There is a few things we need to figure out
>>> in order for that:
>>> 
>>> * Jar files for libraries that are not in a public Maven repository. Jules :
>>> at some point you indicated that we might be able to get such jar files
>>> hosted by the EBI Maven repository. Do you think that is still an
>>> possibility and could you get a few libraries into that? In particular that
>>> would be Jmol, Astex, and probably one or two other Jar files. That would
>>> make the BioJava checkout process much smoother and not require a developer
>>> to manually install jars for full functionality.
>>> 
>>> * We have a couple of modules that are fragmented and broken. This is due to
>>> historic leftovers from when we started the re-factoring process. If all the
>>> functionality has been moved into the new biojava3-core module, I would vote
>>> for removing the modules starting with sequence*
>>> 
>>> Andreas
>>> 
>>> 
>>> -- 
>>> -----------------------------------------------------------------------
>>> Dr. Andreas Prlic
>>> Senior Scientist, RCSB PDB Protein Data Bank
>>> University of California, San Diego
>>> (+1) 858.246.0526
>>> -----------------------------------------------------------------------
>>> _______________________________________________
>>> biojava-dev mailing list
>>> biojava-dev at lists.open-bio.org
>>> http://lists.open-bio.org/mailman/listinfo/biojava-dev
>> 
>> -- 
>> Andrew Yates                   Ensembl Genomes Engineer
>> EMBL-EBI                       Tel: +44-(0)1223-492538
>> Wellcome Trust Genome Campus   Fax: +44-(0)1223-494468
>> Cambridge CB10 1SD, UK         http://www.ensemblgenomes.org/
>> 
>> 
>> 
>> 
>> 
>> _______________________________________________
>> biojava-dev mailing list
>> biojava-dev at lists.open-bio.org
>> http://lists.open-bio.org/mailman/listinfo/biojava-dev
> 
> --
> Richard Holland, BSc MBCS
> Operations and Delivery Director, Eagle Genomics Ltd
> T: +44 (0)1223 654481 ext 3 | E: holland at eaglegenomics.com
> http://www.eaglegenomics.com/
> 

-- 
Andrew Yates                   Ensembl Genomes Engineer
EMBL-EBI                       Tel: +44-(0)1223-492538
Wellcome Trust Genome Campus   Fax: +44-(0)1223-494468
Cambridge CB10 1SD, UK         http://www.ensemblgenomes.org/