[Biojava-dev] JAXB plugin dependencies in sequence-blastxml module

[trevor paterson (RI)]

Hi Andreas

I have been looking at compiling the maven project with Andy and am getting stuck at the maven-jaxb2-plugin specified for the sequence-balstxml module

This is lacking a required version identifier - ( I seem to recall that only core maven plugins can skip the version)

I tried a couple of the available plugins (see http://download.java.net/maven/2/org/jvnet/jaxb2/maven2/maven-jaxb2-plugin/ )

But these were failing for other non standard artifact dependencies..

e.g version 0.6.0
  Path to dependency:
          1) org.jvnet.jaxb2.maven2:maven-jaxb2-plugin:maven-plugin:0.6.0
          2) org.jvnet.jaxb2_commons:jaxb-xjc:jar:2.1.6
          3) org.kohsuke.rngom:rngom:jar:20061207
  Path to dependency:
          1) org.jvnet.jaxb2.maven2:maven-jaxb2-plugin:maven-plugin:0.6.0
          2) org.jfrog.maven.annomojo:maven-plugin-anno:jar:1.2.4

e.g version 0.7.1
  Path to dependency:
          1) org.jvnet.jaxb2.maven2:maven-jaxb2-plugin:maven-plugin:0.7.1
          2) org.jvnet.jaxb2.maven2:maven-jaxb2-plugin-raw:jar:0.7.1
          3) org.jfrog.maven.annomojo:maven-plugin-anno:jar:1.3.1
  Path to dependency:
          1) org.jvnet.jaxb2.maven2:maven-jaxb2-plugin:maven-plugin:0.7.1
          2) org.jvnet.jaxb2_commons:jaxb-xjc:jar:2.1.10
          3) org.kohsuke.rngom:rngom:jar:20061207

Which version of the maven-jaxb2-plugin should the build be using?

And am I missing a required repository for the dependencies for the maven-jaxb2-plugin

Or is it necessary to find these dependencies manually and install them locally?

We are currently configured system wide to use the following repos ( and whatever plugin repos etc you add in project POMs)

Central Repository http://repo1.maven.org/maven2

Java.net Repository http://download.java.net/maven/2/

Netbeans Repository http://deadlock.netbeans.org/maven2/

Trevor Paterson PhD
new email trevor.paterson at roslin.ed.ac.uk<mailto:trevor.paterson at roslin.ed.ac.uk>

Bioinformatics
The Roslin Institute
Edinburgh University
Scotland EH25 9PS
phone +44 (0)131 5274402
http://www.roslin.ed.ac.uk<http://www.roslin.ed.ac.uk/>
http://www.comparagrid.org<http://www.comparagrid.org/>
http://www.thearkdb.org<http://www.thearkdb.org/>

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