[Biojava-dev] maven progress

[Andreas Prlic]

Hi Andy,

this repository location is ssh protected.  Anonymous checkouts are
possible via

svn://code.open-bio.org/biojava/biojava-live/biojava

viewing in your web browser is possible at

http://code.open-bio.org/svnweb/index.cgi/biojava/browse/biojava-live/biojava

Andreas


>>>> The new SVN location is emerging here:
>>>>
>>>>
>>>> http://dev.open-bio.org/home/svn-repositories/biojava/biojava-live/biojava
>
>
> I can't see that from where I'm sitting. Is the server down or are there
> firewalls or other corporateness blocking me out?
>
>
>>
>> At the moment I am chasing an "interesting" problem. When I run the
>> junit tests on the new core module in eclipse, they run fine.   When I
>> do the same via a mvn test I get several issues like the one below.
>> Anybody got an idea?
>>
>>
>> -------------------------------------------------------------------------------
>> Test set: org.biojava.bio.seq.project.ProjectedFeatureHolderTest
>>
>> -------------------------------------------------------------------------------
>> Tests run: 6, Failures: 0, Errors: 1, Skipped: 0, Time elapsed: 0.036
>> sec <<< FAILURE!
>>
>> testFeatureChangeEvent(org.biojava.bio.seq.project.ProjectedFeatureHolderTest)
>> Time elapsed: 0.011 sec  <<< ERROR!
>> java.lang.AssertionError: firePreChangeEvent must be called in a
>> synchronized block locking the ChangeSupport
>>        at
>> org.biojava.utils.ChangeSupport.firePreChangeEvent(ChangeSupport.java:281)
>>        at
>> org.biojava.bio.seq.projection.ReparentContext$PFChangeForwarder.preChange(ReparentContext.java:299)
>>        at
>> org.biojava.utils.ChangeSupport.firePreChangeEvent(ChangeSupport.java:297)
>>        at
>> org.biojava.bio.seq.impl.SimpleFeature.setLocation(SimpleFeature.java:173)
>>        at
>> org.biojava.bio.seq.project.ProjectedFeatureHolderTest.testFeatureChangeEvent(ProjectedFeatureHolderTest.java:297)
>>
>
>
> That's certainly not one that I've ever seen, but then I probably don't
> write code that is as complicated as BioJava :o}
>
> If I could get a checkout (see above) then I would try it out in NetBeans to
> see if it is something that Eclipse is doing to "protect" against the
> synchronisation problem. But I can't get the code so I can't test it :o{
>
>
>
>
> Later,
>
> Andy
> --------
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